PhD and MSc theses from DynaMo Center

PhD theses 

Name  Year Title
Emma Aller Emma Sofie Timm Aller 2021

Epigenetic Impact on Plant Plasticity
Supervisor: Meike Burow & Daniel Kliebenstein

Niels Christian Holm Sanden Niels Christian Holm Sanden 2021

Systemic infrastructure in plants. From sieve elements to seed filling
Supervisor: Barbara Ann Halkier and Alexander Schulz

Dorottya Veres Dorottya Veres 2020

 Post-translational regulation of glucosinolate transporters
Supervisor: Barbara Ann Halkier and Hussam Nour-Eldin

Zeinu Belew Zeinu Mussa Belew 2020

Transport Engineering in Synthetic Biology. Identification and characterization of phlorizin transporters enables increased production in yeast
Supervisor: Hussam Nour-Eldin

Konrad Weber Konrad Weber 2019

Evolution in regulatory networks coordinating development and defense chemistry
Supervisor: Meike Burow

Nikolai Wulff Nikolai Wulff 2019

Unravelling the Transport Mechanism of NPF Transporters
Supervisor: Hussam Nour-Eldin

Cuiwei Wang Cuiwei Wang 2019

 Identification and heterologous expression of biosynthetic genes for glucosinolate production
Supervisor: Barbara Ann Halkier

Pascal Hunziker Pascal Hunziker 2019

Orchestration of glucosinolate biosynthesis, transport and storage upon attack
Supervisor: Alexander Schulz & Barbara Ann Halkier

Peter Sørensen Millard Peter Sørensen Millard 2019

 Structural and functional evolution of R2R3 MYB transcription factors
Supervisor: Meike Burow

Annette Petersen Annette Petersen 2019

Glucosinolate Production in Heterologous Hosts. Choosing the right chassis
Supervisor: Barbara Ann Halkier & Hussam Hassan Nour-Eldin

Sophie Lambertz Sophie Lambertz 2017

Identification and characterization of jasmonate transporters: The role of jasmonate efflux in defense and development
Supervisor: Hussam Hassan Nour-Eldin

Daniel Vik Daniel Vik 2017

Quantitative aspects and dynamic modelling of glucosinolate metabolism
Supervisor: Barbara Ann Halkier & Meike Burow

Sebastian Nintemann Sebastian Nintemann 2016

The spatial organization of glucosinolate biosynthesis - localization of biosynthetic enzymes from the whole plant to the subcellular level
Supervisor: Barara Ann Halkier & Meike Burow

Marie Pireyre Marie Pireyre 2015

The journey of a transcription factor: MYB transcription factor interactions regulating the glucosinolates metabolic network in Arabidopsis. PhD thesis, University of Copenhagen
Supervisor: Meike Burow

Bo Larsen Bo Larsen 2015

Plant transporter identification - A high-throughput functional genomics approach
Supervisor: Barbara Ann Halkier

Morten Egevang Jørgensen Morten Egevang Jørgensen 2015

Identification and characterization of glucosinolate transporters
Supervisor: Barara Ann Halkier & Hussam Nour-Eldin

Nadia M. Mirza Nadia M. Mirza 2014

Engineering and optimization of the chain elongation pathway of glucosinolate biosynthesis
Supervisor: Barbara Ann Halkier

Svend Roesen Madsen Svend Roesen Madsen 2014

Elucidating the roles of transport processes in glucosinolate distribution
Supervisor: Barbara Ann Halkier & Hussam Nour-Eldin

Lea Møller Jensen Lea Møller Jensen 2014

A regulatory RNA inducing transgenerationally inherited phenotypes: studies on natural variation in glucosinolate profiles and flowering time
Supervisor: Barbara Ann Halkier & Meike Burow

Bo Salomonsen Bo Salomonsen 2013

Pathway elucidation and metabolic engineering of specialized plant metabolites
Supervisor: Barbara Ann Halkier

Tonni Grube andersen Tonni Grube Andersen 2012

Novel molecular tools for crop development and synthesis of natural products - understanding glucosinolate based defenses in cruciferous plants.
Supervisor: Barbara Ann Halkier

Morten Emil Møldrup Morten Emil Møldrup 2012

Pathway elucidation and metabolic engineering of plant defense compounds for crop protection - case studies using camalexin and glucosinolates.
Supervisor: Barbara Ann Halkier

Maria Elena Gonzales Romero Maria Elena Gonzales Romero 2012

Towards sustainable potato production using biotechnology.
Supervisor: Barbara Ann Halkier

Master theses

Name  Year  Title 
Katrine Majgaard Jensen Katrine Majgaard Jensen 2021

Transgenerational Plant Defense against Spider Mite
Attack in Arabidopsis thaliana
Supervisor: Meike Burow & Cristina Rioja

Cecilie Berman Cecilie Fomsgaard Berman 2021

Trophic Conversion of Chlamydomonas reinhardtii via Functional Expression of
Passive Glucose Transporters
Supervisor: Hussam Nour-Eldin & Antonina Karakostova

Mie Læssøe Mie Zeka Dannebrog Læssøe 2021

Characterising an Unknown Sugar. Transporter in the Genome of Chlamydomonas reinhardtii
Supervisor: Hussam Nour-Eldin & Antonina Karakostova

Noël Jung Noël Jung 2021

Identification of Glucosinolate vacuolar transporters
Supervisor: Barbara Ann Halkier & Deyang Xu

Harsh Yadav Harsh Yadav 2021

Generating and screening GTR2 transporter mutant libraries for detection of hyperactive
mutants
Supervisor: Hussam Nour-Eldin & Christa Kanstrup

Mads Møller Dissing Mads Møller Dissing 2021

Glucosinolate biosynthesis in yeast
Supervisor: Barbara Ann Halkier

Ojas Tulsyan Ojas Tulsyan 2020

Engineering synthetic recursive amino acid chain elongation pathway in E. coli
Supervisor: Barbara Ann Halkier & Michal Poborsky

Ellen Ask Skotte Ellen Ask Skotte 2020

Identifyding pathogen genes involved in plant host infection.
Utilizing the Arabidopsis-Botrytis interaction for identification of candidate genes
Supervisor: Meike Burow

Ana Luisa Amaro Ana Luise Amaro 2020

Uncaging glycolysis in C hlamydomonas reinhardtii to enable growth on external glucose
Supervisor: Hussam Nour-Eldin & Antonina Karakostova

Mads Emil Larsen Mads Emil Larsen 2020

From growth-inhibiting to healthy: Eliminating progoitrin and enriching glucoraphanin
through CRISPR-induced mutagenesis in A. thaliana and B. napus
Supervisor: Barbara Ann Halkier and Deyang Xu

Karsten Wiberg Andersen Karsten Wiberg Andersen 2020

New insights into the relation between the glucosinolate transcription factors and the ROS related SRO family in Arabidopsis thaliana
Supervisor: Meike Burow & Henrik Frisenvang

Jakob Harken Ellefsen

Jakob Harken Ellefsen

2020

Exploring protein-protein interactions of intrinsically disordered proteins
Supervisor: Meike Burow

Ling Chen

Ling Chen

2020

Optimization of glucosinolate production in Saccharomyces cerevisiae
Supervisor: Barbara Ann Halkier & Cuiwei Wang

Victor de Prado Parralejo

Victor de Prado Parralejo 2019

A novel untargeted extract-based approach to unravel transporters' substrate spectra
Supervisor: Hussam Nour-Eldin

Marie Bolander Jensen	Marie Bolander Jensen 2019

Metabolite profiling of plants grown with beneficial bacteria
Supervisor: Meike Burow

Christa Kanstrup Christa Kanstrup 2018

Gain-of-Function Transporters - Development of a screening system for high-throughput identification and application in transport engineering of specialized metabolites
Supervisor: Hussam Nour-Eldin & Nikolaj Wulff

Tanja Domeyer Tanja Domeyer 2018

Towards sugar-based growth of Chlamydomonas reinhardtii
Supervisor: Hussam Nour-Eldin

Michael Bak Michael Bak 2017

Non-invasive bioimaging of RNA-protein interactions
Supervisor: Meike Burow

Marie-Louise Fobian Thomsen

Marie Louise Fobian Thomsen

2017

Natural Variation in Root Growth Response to 3ohp
Glucosinolate: Utilizing Natural Variation for Identification of Functional Targets of 3ohp
Supervisor: Meike Burow & Frederikke Malinovsky

Christian Arentz Sørensen

Christian Arentz Sørensen

2016

Increasing the rate of homologous recombination in C. reinhardtii
Supervisor: Hussam Nour-Eldin

Vlastimil Novak Vlastimil Novak 2016

High-throughput identification of transporters for plant specialized metabolites
Supervisor: Hussam Nour-Eldin

Thies Gülck Thies Gülck 2015

Microbial production of glucosinolates using synthetic biology
Supervisor: Barbara Ann Halkier

Emma Timm Aller Emma Timm Aller 2015

Epigenetic regulation of plant defence: assessing the impact of DNA methylations on glucosinolates
Supervisor: Meike Burow

Peter Vig Millard Peter Vig Millard 2015

Structure-function relationship of MYB transcription factors in Arabidopsis thaliana
Supervisor: Meike Burow

Annette Petersen Annette Petersen 2015

Genetic Engineering of Chlamydomonas reinhardtii - Glucosinolate production in green microalgae
Supervisor: Hussam Nour-Eldin

Lea Gram Hansen Lea Gram Hansen 2015

Protein and metabolic engineering for microbial production of glucoraphanin
Supervisor: Barbara Ann Halkier

Nora Linscheid Nora Linscheid 2015

Towards rationally engineering specialized metabolite transport in plants
Supervisor: Hussam Nour-Eldin

Sophie Lambertz Sophie Lambertz 2014

Identification and characterization of plant transporters from the model plant Arabidopsis thaliana
Supervisor: Dietmar Geiger (U of Würzburg) & Hussam Nour-Eldin

Daniel Vik Daniel Vik 2014

Investigations of the putative glucosinolate metabolon
Supervisor: Barbara Ann Halkier

Morten Egevang Jørgensen Morten Egevang Jørgensen 2012

Regulation of glucosinolate transport: Effects of phosphorylation on AtGTR1 and AtGTR2 transport activity
Supervisor: Barbara Ann Halkier & Hussam Nour-Eldin